Last modified: 2014-06-24 07:29:31 UTC

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Bug 66995 - Please install openbabel
Please install openbabel
Status: RESOLVED FIXED
Product: Wikimedia Labs
Classification: Unclassified
tools (Other open bugs)
unspecified
All All
: Unprioritized enhancement
: ---
Assigned To: Yuvi Panda
:
Depends on:
Blocks:
  Show dependency treegraph
 
Reported: 2014-06-23 20:38 UTC by Rainer Rillke @commons.wikimedia
Modified: 2014-06-24 07:29 UTC (History)
4 users (show)

See Also:
Web browser: ---
Mobile Platform: ---
Assignee Huggle Beta Tester: ---


Attachments

Description Rainer Rillke @commons.wikimedia 2014-06-23 20:38:15 UTC
http://packages.ubuntu.com/precise/science/openbabel

I'd like to be able to convert molecules.

Thanks in advance.
Comment 1 Gerrit Notification Bot 2014-06-23 20:41:33 UTC
Change 141566 had a related patch set uploaded by Yuvipanda:
tools: Install openbabel

https://gerrit.wikimedia.org/r/141566
Comment 2 Daniel Zahn 2014-06-23 22:37:22 UTC
 This package includes the following utilities:
  * babel: Convert between various chemical file formats
  * obenergy: Calculate the energy for a molecule
  * obminimize: Optimize the geometry, minimize the energy for a molecule
  * obgrep: Molecular search program using SMARTS pattern
  * obprop: Print standard molecular properties
  * obfit: Superimpose two molecules based on a pattern
  * obrotamer: Generate conformer/rotamer coordinates
  * obchiral: Print molecular chirality information
  * obrotate: Rotate dihedral angle of molecules in batch mode
Comment 3 Gerrit Notification Bot 2014-06-23 22:42:22 UTC
Change 141566 merged by Dzahn:
tools: Install openbabel

https://gerrit.wikimedia.org/r/141566
Comment 4 Daniel Zahn 2014-06-24 00:14:38 UTC
Start-Date: 2014-06-23  23:38:54
Commandline: /usr/bin/apt-get -q -y -o DPkg::Options::=--force-confold install openbabel
Install: libopenbabel4:amd64 (2.3.0+dfsg-3ubuntu3, automatic), openbabel:amd64 (2.3.0+dfsg-3ubuntu3)
End-Date: 2014-06-23  23:39:01


root@tools-exec-03:~# babel
No output file or format spec!
Open Babel 2.3.0 -- Dec 17 2011 -- 16:15:08
Usage: babel [-i<input-type>] <name> [-o<output-type>] <name>
Comment 5 Rainer Rillke @commons.wikimedia 2014-06-24 07:29:31 UTC
Looks good! Thank you!

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